rs49827064 SNP Detail

Summary

• ID
  rs49827064
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122798802 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTACCACAG AATTTCTTCT ATTTTCTCTT TCTTTTGATA
  GAATGTTTGC TATGCTTCCT CACCGGGAAA TTACAGATGT GAATCCCCAC CCCACCTCCA
  R
  CAATTTCCCT CAAATCAATG ATGAATATTA TTATTCTATA TAAATTACTA CTGTTTTTCA
  GTGCTTAGGT TTAAACATAG GGCCTCATGA ATGGTAGTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135754532	ENSMUSSNP6684204	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320916475	CHEV_3_122708071	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49827064					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122798802 () rs orientation: forward

Symbol	Name	Function Class
Myoz2	myozenin 2	1053 bp downstream