rs49827122 SNP Detail

Summary

• ID
  rs49827122
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117737331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T AGTGCACTGT GGATTTGCGG ATTTGTGCAG TATGTATGTG
  AGGGTTGAGA GTTGGAGAGA TAGCTCAGTG CACAAAGAAC TTGCCCAACA ATCCAGAGGA
  A
  CTGCGCTCAG ATCTCTATTG ACCAAGTAAA GGCAGATGCA ATAGTTTGTC TGCAGTCTCA
  GTAATGTTAT AATGAGTTGA GATGCAGAGA CAGGCAAATT C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss133580916	ENSMUSSNP536912	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49827122					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117737331 () rs orientation: forward

Symbol	Name	Function Class
Rr637359	regulatory region 637359	1562 bp distal
Rr637360	regulatory region 637360	1658 bp distal