rs49830704 SNP Detail

Summary

• ID
  rs49830704
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70118189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTATGTACA TCATTATAAA
  TGAAGAAATG TTGTTTAGAA GAGTGCAGAA ATGCCCTGTT GGCTAAAACT TCCGCCATAG
  ACTCTGGCTT TAGGGTCCAT GACAAGGTAT TGGTAGCCAT GGTCTATTTA CTGTATGATT
  GGACTAAAAC CTATGTATGT GAGTCTGCTC TCTGTCTTGG CCCGGAGAGT GTGATTGATA
  R
  GGTTTTTGTG AACAAACTAT GCAGAGATGA TTGAGTAAAC CTGACTTGGC CATTGCCTTT
  GAAAATGTCT GAGCTATATT CCTTTTTCTT TACTGTGTAT TATTCTTGAG TTGCTAGCAG
  GTATAGTACC CACACACACA AGACCGATTC ATTCATTCAT TCATTCATTC ATTTGAGACG
  GTGTTTCTCT GTGCAGCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136604705	ENSMUSSNP5421897	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49830704					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70118189 () rs orientation: forward

Symbol	Name	Function Class
Gm26849	predicted gene, 26849	within coordinates
Gm68934	predicted gene, 68934	421 bp downstream
Myo1e	myosin IE	within coordinates
Rr206677	regulatory region 206677	1388 bp distal
Rr206678	regulatory region 206678	988 bp distal
Tssr90403	transcription start site region 90403	814 bp downstream