rs49832515 SNP Detail

Summary

• ID
  rs49832515
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169343632 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAAATGT CTGGTGGGCT
  GTTTCTAATG AAATCAAATT CCCAGTTGTT TCCCATTAGG TCATTTTGTC ATTTATTCAG
  CTTTGCTAAA TCCATACCTT TGTTTTGATG TACACCCCCC TGCCCCAACA CATACACACT
  CTTTAGAATG TAGGCAAACA GAACTGAGTG GCTGTAGTCC ACCCAGTAAG CCCTACATCA
  Y
  CTTCATGGTA GTCACAGACA TGCGTCCCCT TAGACACATC CATCAGTGAA TTCAGCATTT
  TCCAAGGAAC AAAAGAAAGG GTCGGCCCAT TTGCACATGG AGAATACTCC CTCGATGTGC
  TAAGAGTTCC TAATGAGGAC AGCAGCCATC TGGCAAACAA CCCACTAGAT TGAAACAACA
  ACAAAGTCAA CATAAGCAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss148286666	ENSMUSSNP2634760	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs49832515					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169343632 () rs orientation: forward

Symbol	Name	Function Class
Gm14249	predicted gene 14249	within coordinates
Rr571204	regulatory region 571204	within coordinates
Rr571205	regulatory region 571205	1033 bp proximal