rs49834133 SNP Detail

Summary

• ID
  rs49834133
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:65140669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCTGTCTC CACCATCTGG
  ACTCCTTGAG CATTGCTCTT GCGGACACGA TAACACAAAT AGTCACACAC ATGATAATCA
  TTTAAAAAAT AAAAGTATGA AACCATGAAG CAGCCGAATA AGGAAAGACG AATTGTGGTG
  GCCCAGTCTC ACTAACTTTC CTCATCAAAA CACTCCCCTG TTTCGTGGTC TCGGAATCAC
  R
  CTCATGTTTA GTAAGCGCAT GTAATAAGTA AGAAGTGGCT ACATAAGTCA CTGTGCTAGT
  CACTTATGAA CGTCAATCAC ACAAAAGGTA AAGGCGTGCA CCCCCTCCTG AGGAGCATCC
  CTTATGAGGC ACTTTGTTGG AGAATTACAA AATAAATCCT GACTGGTGAA ATAATGAATG
  CCTATACTGT ATTGTATGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss60622518	NES16302486	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	G	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs49834133					SNP	A	A	A	A	A	G	A	A	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60622518	NES16302486	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:65140669 () rs orientation: forward

Symbol	Name	Function Class
Cpe	carboxypeptidase E	within coordinates
Tssr81419	transcription start site region 81419	1842 bp downstream