rs49836744 SNP Detail

Summary

• ID
  rs49836744
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:66380912 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAA CCAAACCAAG TCCCACCACG
  T
  CACACCCCTT AGAGGTCCCA CTGCC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss148587118	ENSMUSSNP1238433	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321563148	CHEV_5_66614808	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs49836744					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:66380912 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15907	CpG island 15907	152 bp distal