rs49847605 SNP Detail

Summary

• ID
  rs49847605
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171180353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTAC AGGCCTAGCT GAGGCAGACT
  S
  TGAGGCTATG CCACTTGAGG CTAGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss119997763	PARCsnp_1.12959	PARC_SEQ	INBRED	f	SNP		C	G
ss119999695	PARCsnp_1.02116	PARC_SEQ	INBRED	f	SNP		C	G
ss146160847	ENSMUSSNP5373095	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320118186	CHEV_1_173282916	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs49847605					SNP	G	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171180353 () rs orientation: forward

Symbol	Name	Function Class
Gm37154	predicted gene, 37154	1341 bp upstream
Pfdn2	prefoldin 2	within coordinates