rs49851036 SNP Detail

Summary

• ID
  rs49851036
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:81114012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATCCCTC TTGCCCCTAA
  GGCTGAGACC ATCACAAAGT GAGTGGGGAG AATGTAAAAG CCAGAAATTG AGGCACGCGG
  GAAAGAAGCA GTGTCTTCCG GAATGGCAGG ATTGCTACAC TCATGATGCC AGCTTTGTTA
  CCTGAACCCA ATCAAGACAG TCAACATTCC AGCATGAGAA GTGAGGAGGC CTCAGGAGCT
  S
  CCCAATCCAG CTGAGGCACT ATTGATAATT GGTGGCTTCT GGAGGAGGAT GAATCTGTTT
  TCTTGGAGGA TATGGTCCTG GGTAGGTCAA CCATGCTCCA CATGCATGGA CATATGGGAG
  CATGAACTGA ACTCTGAGTT ATAAACCAAG AAAGGAGAAA TGATGTTCTA AAGTTGGGAA
  GGGTGGTGGA TCAGGGAGGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146076309	ENSMUSSNP298244	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49851036					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:81114012 () rs orientation: forward

Symbol	Name	Function Class
Gm33596	predicted gene, 33596	648 bp downstream
Rr393005	regulatory region 393005	1273 bp downstream
Rr393006	regulatory region 393006	993 bp upstream
Rr531544	regulatory region 531544	1501 bp proximal