rs49859617 SNP Detail

Summary

• ID
  rs49859617
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126680480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCC ACCACACGGC TGGTCACCTC
  K
  CCTCAGTTTC ATGCATCCAA CTTCC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147726469	ENSMUSSNP5270215	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss323528327	CHEV_10_126281667	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49859617					SNP	T	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126680480 () rs orientation: forward

Symbol	Name	Function Class
Gm66841	predicted gene, 66841	1308 bp upstream
Rr440688	regulatory region 440688	34 bp proximal
Rr440689	regulatory region 440689	269 bp proximal
Rr440690	regulatory region 440690	818 bp proximal