rs49884932 SNP Detail

Summary

• ID
  rs49884932
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185246852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTGATGGCT CATAACCATT TATAACTCTA CTCCCAACAG
  ACCTGACGCC CTTCTTCAGG GCTCTCTGAG CACTAAGCAC GAATGTGGTA AACAGACATA
  Y
  GCTCAGGAAA ACAGCCATAA AATAATAATA ATTAGATAAA ATGGAGAGTA AGAGAAAAAG
  ACACCCAGTG CCAACCTCTG ACATTACTCC TAAAAAAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146434970	ENSMUSSNP2311879	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49884932					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185246852 () rs orientation: forward

Symbol	Name	Function Class
Rr425406	regulatory region 425406	284 bp proximal