rs49887088 SNP Detail

Summary

• ID
  rs49887088
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:144075575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACAGGCTGG GAGATGATGT TTCAAACCAC CTACCCAACA
  AAGATCACAC TCACAAAGCT TCACAGTGCA AAACAAGCAG CTCAATTAGA CACAAAACCA
  R
  GAGACCCAGA CACCTCTCTG AAGAGGAGAT CCAGGCAACA AAACACGTTC TGCACTGCTA
  GCCACCAGGG AAATGCAAAT TGGAACCACT GAGACAACA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147788117	ENSMUSSNP7125348	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49887088					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144075575 () rs orientation: forward

Symbol	Name	Function Class
Gm75267	predicted gene, 75267	within coordinates
Rr397360	regulatory region 397360	within coordinates
Rr566413	regulatory region 566413	within coordinates