rs49892755 SNP Detail

Summary

• ID
  rs49892755
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107342577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCAGGCT TGGACCCATA
  GAGCAGTACA GTTGGGCCTG AATCTCAGCT TCACCTCTTT CAGGACTGTG ACTTTGAAAG
  TATGAACTTA CATGTCACGC TGCATTTTTT TCTCTGTGGA GCAAACTGTT ACACCAGTCT
  CAGAATGCCC TTCCATGAGC ACTGCACACA TCTCAGGCGA AACGCATGCG TGCTGTTTGT
  M
  AATTATTCCC CTAACCCCTT GGTTAAAAGA ACAGGGCCTC GGGCTGGAGA GATGGCTCAG
  CGGTTAAGAG TGGTAAAGAT GACTGCTCTT CCAGAGGTCC TGAGTTCAAT TCCCAGCAAC
  CACGGGGTGG CTCACAACCC TCTGTAATAG GATCCAATAC CTTCTTCTGG TGTGTCTGAA
  GACAGCTGCA GTGTACTCAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135583987	ENSMUSSNP2439970	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49892755					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107342577 () rs orientation: forward

Symbol	Name	Function Class
Rr582971	regulatory region 582971	1167 bp distal
Rr582972	regulatory region 582972	1136 bp distal
Rr582973	regulatory region 582973	1204 bp proximal