rs49892836 SNP Detail

Summary

• ID
  rs49892836
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:45607694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATCATACA GTAAATAAAA
  GCACAATTTG CCTTTTATGT AAATTTTGAT TTATTGTTAT GTGAACGAGG ATTTGAAGCA
  AGAGCCAGGA AATCAATTTC AAAGACGACA GCAGCTGCTG TGTCTTTTAT TGTTCTAGGA
  GGTAATTCCA TGTTTTTGTA CCAAGTGGGT CTATTTTAAA CTGAGAAAGC ACTACAGAAC
  S
  TGTACCTTGA CAAGGGATCC TAAGATTTAG AAGCTGAAAC AGGTATGAAA GGTTTTTCTA
  GCCAAGCTTA TTTCCCAAGT GAATTTAAGG TAACACAGAA CAGCTTCATA TTATTACTTA
  GCATAGCAAG ACATCAGGGA TACAGCAACT GTCTTGAGTA CACACGTAGT CCCATCTTCC
  ACAAACCGTC TTCCAAGACC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	WSB/EiJ
ss52410593	NES15387127	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	WSB/EiJ
rs49892836					SNP	C	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52410593	NES15387127	PERLEGEN	MM_PANEL	f	SNP	C/G