rs49901211 SNP Detail

Summary

• ID
  rs49901211
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84413903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAGCTGGC ATCGCAGTCT GAAGGCTGTC TGATGGGGGA
  CTTCTCCCAT CTGGGGTTAA CCTTCTCTTC TAGCCAGTCC TCCCACTTAC TAGGTAAGCC
  M
  CACCTACACT CTGCAGAGTA ATCTGCTTGG GAAGGCTTAA ATGTTAATCC TATTAAAAAC
  ACCTTTATAG AAACGGCCAA GATATTTGAC CGAATATCT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss146130440	ENSMUSSNP2657713	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49901211					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84413903 () rs orientation: forward

Symbol	Name	Function Class
Rr531986	regulatory region 531986	1818 bp distal
Tssr146028	transcription start site region 146028	1707 bp upstream
Tssr149629	transcription start site region 149629	49 bp upstream