rs49906742 SNP Detail

Summary

• ID
  rs49906742
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:73568685 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAT TACAGATGGT TGTGAGCTAC
  Y
  ACGTGGTTGC TGGGATTTGA ACTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145931071	ENSMUSSNP6145195	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss325448743	CHEV_17_73611030	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49906742					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:73568685 () rs orientation: forward

Symbol	Name	Function Class
Gm65147	predicted gene, 65147	within coordinates
Rr370312	regulatory region 370312	1400 bp upstream
Rr530758	regulatory region 530758	955 bp proximal