rs49913954 SNP Detail

Summary

• ID
  rs49913954
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:44372010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCCTCCCT TGTCTCCTTT
  TCCTTTGCTG TTGTGTTCCT TTTATGTTGG TTTCACTGAT AAATACATGA TAGACAGACA
  GATGGATGAT AGATAGATAG ATAGATAGAT AGATAGATAG ATAGATAGAT AGTGACCTAA
  CCATTTAGTG TTATATAACC AATTGGTATT CCCTTTTTTA AGAAAGACTA TTTCTCCTAC
  Y
  TAGCATTTCT TTTATTGCCT GTAGTTCTTT GCCTAGAGTT GAGCCTCATA TAACAAATTT
  TCTTACCCCA CCATCTGTTA GTACCTAGTT ATTATCAATA GGTACTCATA AATATTTGAT
  GAAGAACAAC TTCCTAAAAT GTCCTTTGCA CTTCACATGA TTTTGTAATA ATAAAACATA
  TAAAAAGGAA AATTCTCTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146482735	ENSMUSSNP4596197	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49913954					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:44372010 () rs orientation: forward

Symbol	Name	Function Class
Gm74735	predicted gene, 74735	within coordinates
Rr373113	regulatory region 373113	761 bp upstream