rs49916251 SNP Detail

Summary

• ID
  rs49916251
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126838377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGCTCACA ACTACCCGTA ATGAGATTTG ACACCCTCTT
  CTAGTGTGTC TGAAGACAGC AACAGTGTAC TTATTTATAA TAATAAGTAA AAAAATTTTT
  A
  AAAGAAATTC TATCTGGAGA AAGGTATTTC AAGTATTGAC TTATCAAAAA ATTGCTTTGT
  GCTTCTCCTG TGAATTTTAG TCTGAGAGAG AGAAGGCAA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147516194	ENSMUSSNP6661111	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49916251					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126838377 () rs orientation: forward

Symbol	Name	Function Class
Rr564430	regulatory region 564430	1691 bp distal
Rr564431	regulatory region 564431	212 bp proximal