rs49917445 SNP Detail

Summary

• ID
  rs49917445
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:122004226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTGATCAA GACAGCATAT
  TGCTGTTGTT GACAATGATT TAAGTGCACA CATGTTCTTT TTATGTCGAA ACAGTAGGAA
  AAACATCTAA ATAGCATGTC CAGGATCTTA AGGCAGTCTG GTATTAGGCA ACCAAGGAAG
  TTCTTCTGTG GTTTTCCTCA TAAGATGATG CTTGGATGTT CATTTGAAGG CAGAACAAAT
  R
  TGTGTGGATT GTGAACAAAA AGCTCTCTCT CCTAGTGTTA GTCTGAGTTG CACTAAGTTG
  GGCTTAGGAT CCCTATTCGT GATAGCAGCA CAGCCTTTGC TGCGTGCACT GCAGTGATAG
  CTGCTCAAGT CTTCTCTTGT CCTTTAGGAG AAGTTACAAA ACTAAGTTAC AAAGTAACGA
  AGTTACAAAG TAACGAAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61326531	NES16938857	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49917445					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61326531	NES16938857	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:122004226 () rs orientation: forward

Symbol	Name	Function Class
Gm9081	predicted gene 9081	1052 bp upstream