rs49918259 SNP Detail

Summary

• ID
  rs49918259
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:56526653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTGCTTTTG TTAATCAGTC TTCTCCTTTT AGTTCTTACG
  GCGCTGTGGT TGGATATCTG TCTTTACCCT GAGTGGGGCT TATTGTGTAT GGATTTCTGG
  R
  CAAATACTTC AAGACTCCTT CCTATTTTAA TTGCAGTAAA ACCCACGTTA CAAGAATTAC
  CACATTAACT ATTTCAAGTA TACAGCACAG TGGTGTTAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss61809679	NES17749635	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G	A	G	A	G	G		A	A	A	A		G
ss324346585	CHEV_13_56480201	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs49918259					SNP	A	A	G	A	G	A	G	A	G	G	A	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61809679	NES17749635	PERLEGEN	MM_PANEL	f	SNP	A/G