rs49918313 SNP Detail

Summary

• ID
  rs49918313
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26492102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATACA TGCATCTCTC CGTGGTGCTT
  T
  CAGCAGGGGT TGAAGTGGGG GAAGT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss137438964	ENSMUSSNP1787433	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss323950898	CHEV_12_27126968	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49918313					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26492102 () rs orientation: forward

Symbol	Name	Function Class
D12Mit219	DNA segment, Chr 12, Massachusetts Institute of Technology 219	990 bp distal
Rsad2	radical S-adenosyl methionine domain containing 2	643 bp downstream
Tssr112998	transcription start site region 112998	1638 bp upstream
Tssr112999	transcription start site region 112999	1685 bp upstream
Tssr113000	transcription start site region 113000	1809 bp upstream
Tssr115902	transcription start site region 115902	754 bp downstream
Tssr115903	transcription start site region 115903	1086 bp downstream
Tssr115904	transcription start site region 115904	1103 bp downstream
Tssr115905	transcription start site region 115905	1408 bp downstream
Tssr115906	transcription start site region 115906	1536 bp downstream
Tssr115907	transcription start site region 115907	1591 bp downstream
Tssr115908	transcription start site region 115908	1631 bp downstream
Tssr115909	transcription start site region 115909	1717 bp downstream
Tssr115910	transcription start site region 115910	1769 bp downstream
Tssr115911	transcription start site region 115911	1819 bp downstream
Tssr115912	transcription start site region 115912	1833 bp downstream
Tssr115913	transcription start site region 115913	1868 bp downstream
Tssr115914	transcription start site region 115914	1920 bp downstream
Tssr115915	transcription start site region 115915	1949 bp downstream