rs49926638 SNP Detail

Summary

• ID
  rs49926638
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:144074804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTAACCTCTA CATGCGTACT CTAGTACACA TGTGCATACA
  CACACACACA CACACAAATA ATGTAACAAA AATTTTTTTC AGAGAAAATT TTAAAGAAAC
  A
  GAGAGTCACA ATATTTGTGA ATTAGATTAC CCCAAACAGT AGTCAGTCAG TTTGTCACAA
  ACTGACAGGC TTAAGGCTGT TGCTATTAGA ACTCCAATT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147788066	ENSMUSSNP1625141	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs49926638					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144074804 () rs orientation: forward

Symbol	Name	Function Class
Gm75267	predicted gene, 75267	within coordinates
Rr397360	regulatory region 397360	665 bp upstream
Rr566412	regulatory region 566412	1335 bp distal
Rr566413	regulatory region 566413	670 bp proximal