rs49935094 SNP Detail

Summary

• ID
  rs49935094
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8413677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACATTCACA CATATGTATA
  CATACACACA TATACATATG TAATCAATAA ACAAAGAATA AATATAAGAG AAGGATTGAA
  GAGATGGCTC AGTCAGTAAA TGCTTATAAA GCAAGCATGA AGCTCCAAGT TCGATTCCCA
  GAACACTCGT GAAAAAGGCC AGACACTCCT GTGATCCCAG GTACTGCGGA GACAGGAAGA
  R
  GAGGATCTTG TTGACCCAGG CTCTCTAGCT CAGTGCTAAG CTTACTGGGA GACTCTGACT
  TAAAAACTAA GGTAGGCTGG GCCTGGAGAC CAAAACTGAG TTCTCAGCAC CATCAGGCAG
  CTCACAACTG CTATAACGCC AGCCTCATGG TAACCCACAA CCGCCGATCT CAGGCACCTG
  TGCACACGTG CACACAAATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137108515	ENSMUSSNP3543388	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49935094					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8413677 () rs orientation: forward

Symbol	Name	Function Class
Gm33134	predicted gene, 33134	261 bp upstream
Rr462572	regulatory region 462572	347 bp proximal
Rr462573	regulatory region 462573	1599 bp proximal