rs49944964 SNP Detail

Summary

• ID
  rs49944964
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:74752822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTAGTAAA TGACAAACCT
  CACATGGAAG TAGTCCTCCT TCAGTCCAGT TACTCTAGAA CAAGAGAAAG GAAACAAGCT
  GAGGTCTCCC TTCCACGTTG GAGCTTTTGT AAAAACACCC TGCAGATTTC AATAACTCTG
  TCTAGTTTGG CCATGCATGT GAGTTTCTCA AGATTCAGTC ACAGCTTTCC GTGGTTCTTG
  R
  TGGTCAATGC CTGGCAGATG CCTTCACTGC TCCTATAGAC TCTGAAAAAG TGGCCAAGAA
  CACCACAGAA GAAATATTCA ACTACTCACT GAGGACCACT ATCTTGGTCC CTATGCATCA
  AGGACTTGGA CAGTGAAGGT TCCGGATTCT GCAGGGGCCA GTATCAAGAA GAGAATAGCT
  CTCTACTGAC CCACTGCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61645508	NES17588982	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49944964					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61645508	NES17588982	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:74752822 () rs orientation: forward

Symbol	Name	Function Class
Gm47619	predicted gene, 47619	320 bp upstream