rs49948356 SNP Detail

Summary

• ID
  rs49948356
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:27132887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GTCAAGTCAA CTGGACAAGC CGAAAGGCTT AAAAGTCACT
  CATGAGGCAA AAGAGTTTCA AGGAAGCTCT CCTCCTGGAG GCTAGTGTTC TCTACCCATA
  C
  ATTAATTTTT CATTCCCGAG TTCCAGTACC ACGCTAGTCT AGAGTATGGA TCCACGTGCT
  CTCTTTCAGT ATTTTCCTAT AAGTGCTCTG ACATGGCTAA A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss148764556	ENSMUSSNP1713513	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs49948356					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:27132887 () rs orientation: forward

Symbol	Name	Function Class
Rr376259	regulatory region 376259	within coordinates