rs49948571 SNP Detail

Summary

• ID
  rs49948571
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:17215221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCC AGGGAGTGGA GAAGCCTCTT
  R
  CAAAAGCCTT ACTAACCTAG ACGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss146105363	ENSMUSSNP5916904	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss325727400	CHEV_19_17312347	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs49948571					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:17215221 () rs orientation: forward

Symbol	Name	Function Class
Gm50276	predicted gene, 50276	190 bp downstream
Rr544814	regulatory region 544814	677 bp proximal