rs49951990 SNP Detail

Summary

• ID
  rs49951990
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84327732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTGAGAAGT GATAGAAGCC ATGCAGGCCT AGAAGGGGGA
  GAGGTAAGAT GGAAAATGAG GTAATACTTT ACATTGTTTT TAGACTTTAT GTCGATACAT
  R
  ATTTAGCTGC ATGCATGTAT GTGTACCACA TATGAGCCTA CTGGATTCTC TGAATCTGTG
  GTTATTAGTG ACTATGAGCT GCCATATGGA TGCTGGGGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss145357768	ENSMUSSNP1270935	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322745025	CHEV_8_86125002	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs49951990					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84327732 () rs orientation: forward

Symbol	Name	Function Class
Gm18001	predicted gene, 18001	403 bp downstream
Gm42029	predicted gene, 42029	within coordinates
Rr178049	regulatory region 178049	869 bp proximal