GGCAG ACGTCCATAC CTCAGCTTCT T GGTTTTGTTT TGTCTGTTTT GTTTT T = T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss148573951 | ENSMUSSNP2078593 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | ||
ss325280264 | CHEV_16_93816219 | CHEVERUD | SCREENING_POP | f | SNP | T | T | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
LG/J |
SM/J |
||||
rs49957533 | SNP | T | T | T | T |
Location: Chr16:93612862 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm30881 | predicted gene, 30881 | within coordinates | ||||||
Rr325602 | regulatory region 325602 | within coordinates | ||||||
Rr370142 | regulatory region 370142 | 417 bp upstream | ||||||
Tssr142206 | transcription start site region 142206 | 414 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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