rs49967960 SNP Detail

Summary

• ID
  rs49967960
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121614699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTTTATAG TGATACATTT TGAGATAAGA CATATAAACT
  GTCTTATAAC GACATGTGCC AATATGTTAA CTCATACGGA ACTATCCAAT TTGTGTAGGT
  M
  ATAAATTGGT TAAAGACTTA TTAGTGGTTA TTGTTGTTAT GGAGAAAAGA CAGAACTCAG
  CAGATGAAGA GGACACAGGA CATCTGAGGA TGAGTGTAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135729774	ENSMUSSNP2730303	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
ss320906082	CHEV_3_121523968	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49967960					SNP	A	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121614699 () rs orientation: forward

Symbol	Name	Function Class
Rr584177	regulatory region 584177	233 bp distal
Rr584178	regulatory region 584178	685 bp proximal