rs49985742 SNP Detail

Summary

• ID
  rs49985742
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:86984754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGTGGATCT GGGGAAGGGT GGAGGAAGGG GAAGCTGCAG
  TCAAATGTAT TGAAAAGAAA AATCCAGGGG CTTGTCCTTC ACTAGACATT CCCTAAGAAC
  R
  GTACCTTGTT TTAACTATTC TACCAGATAG AAACTAAGGG CAACCTGTTG CACAGTTCTG
  CATTGTAGGC CCTGGCTCAC AGTTATTAGC AGTGCTTAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss139889469	ENSMUSSNP1534531	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49985742					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:86984754 () rs orientation: forward

Symbol	Name	Function Class
Diaph3	diaphanous related formin 3	within coordinates
Gm41224	predicted gene, 41224	198 bp upstream
Rr297552	regulatory region 297552	1446 bp proximal
Tssr4496	transcription start site region 4496	1787 bp downstream
Tssr129931	transcription start site region 129931	1750 bp downstream