rs49986332 SNP Detail

Summary

• ID
  rs49986332
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:105247664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTCAATGTG AGGGTTGCTA CAGGCTGGGC AGGAGGGAAA
  AGTCTTTGGA AACACAGTAG GCAAAAAATG ACTTCCAATT TATAGATGGA AGAAAAGGGG
  R
  TGTTTCTGAC TCCACTGTCC TGTGTTCTAT CACTAGTGTT GGACCTTGTG ATGTCACTAG
  AGGCTTGTTC TATGTATACA ACATACACAT TTTGTCCTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147499336	ENSMUSSNP5833784	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss323448199	CHEV_10_104848859	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49986332					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:105247664 () rs orientation: forward

Symbol	Name	Function Class
Gm66627	predicted gene, 66627	1492 bp upstream
Tmtc2	transmembrane and tetratricopeptide repeat containing 2	within coordinates