rs49993532 SNP Detail

Summary

• ID
  rs49993532
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66813139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCAATTAA GAAAATGTTA AAATAATTTG ACATAGGATC
  TCAAACAGGA AGTGTTAAAA TCAGGAGCTG AACTTGGGGT TTCCAGGTCA ACAGTCTACT
  Y
  TCCCACTTTG TCTGCTGATC ATAACTTAGA TCAGAACTCT GAAAGAGACC TTAGACTTTT
  CTAGAGCAAG ATCCCCTTCT GCCATGCAGG GACAAACACC                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss61411545	NES16801142	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs49993532					SNP	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61411545	NES16801142	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66813139 () rs orientation: forward

Symbol	Name	Function Class
Rab8b	RAB8B, member RAS oncogene family	within coordinates
Rr196777	regulatory region 196777	62 bp proximal
Rr201403	regulatory region 201403	1739 bp distal