rs49994977 SNP Detail

Summary

• ID
  rs49994977
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32912889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAATCTTT TCTTTCTCGG
  AAGAGAATTG GTCATTCTGG TCAGTTTTCT CTAGAAGTCA CAGAACACAA AAAATTTTAA
  TGAAGAATGC ACATGGTCAC TAATTTTGGC TTTATTTAAT GGCACCTCTT TTCTGGCCCC
  TTTTTAACAT TAGATTTAAG CTTTCAGAAG CAAAGCAGAA TAAAATATAC CCAGCTGACT
  R
  ATAACTGCAT ATCAAAATAT TTTATTTGTC ATGGTTATGG CCAAACCCAG TCAGATAAAG
  ATATTAATAA AACAGTACTC CTTTCTACAG GATTCAGGAA TGTGTGATTT CCTCTGAATT
  AGAGTACAAC AGACTTTCTC CATAACTAGT AAATCTCCTA GGATGTTACC TGTGAGGGCT
  GATGTCCTTC CTCCTTTGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148850681	ENSMUSSNP6493067	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49994977					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32912889 () rs orientation: forward

Symbol	Name	Function Class
2310045N14Rik	RIKEN cDNA 2310045N14 gene	1934 bp upstream
Mylk4	myosin light chain kinase family, member 4	within coordinates