rs50007099 SNP Detail

Summary

• ID
  rs50007099
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:49011684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCCTTAGCA CTCCCTGGGA AACCAGCCCA GAGTCTTCAG
  CAAGTCTCAG GTTGCAACGA GTGACTTTGC CTTGAAGAAA TCCAAGATGG ATGACTCCTG
  T
  AGAGATGACA TCTGAAGTTG ACCTCTGGCC TACACTTATA CACCAATTTC CACACTAAAT
  CCCTCTTATG CACCCCAGCA GACACACAAG AACCTTGTC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145722321	ENSMUSSNP5437354	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325410133	CHEV_17_48843981	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50007099					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:49011684 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr13	DNA Segment, Chr 17, Derry C. Roopenian 13	1656 bp proximal
D17Mit178	DNA segment, Chr 17, Massachusetts Institute of Technology 178	1656 bp proximal