rs50012545 SNP Detail

Summary

• ID
  rs50012545
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34081418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATATAATC CTGGTTCCTT
  CTGCTGCAGA CCCAAAGGAA ATGGAAAGGC TGTCTCAAAA AATACCCATA CCCCTATGTT
  CTCTGCAGCA TTAGCCACAA TAGTCAAGAT GGAAACAGCC AGATGTCCGT CAAGGAAGGG
  TGTCTTAGCT GGGTGTGATG CTGCAAGTTT GCAGTCCCGA ACTCGGGAAG CAGGAATATC
  A
  GGAGTTCAAA GTCGAGCCTC AGCTACATAA TGAGCTCAAG GCTAGCACGG GTATGTGAGA
  CTCGGTCTCA AGAGAAAGAA AGAAACAAAC AAACAGAATC AACCAAACAA CTAAAACCAA
  GCAACAAAAA GTAGCTAACA AGAGTTTACT ATGTATGCAC AACACAATGT TAATCAGCTT
  GAAAAAGCAG GCTTTGCCAT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss139269704	ENSMUSSNP1779595	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50012545					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34081418 () rs orientation: forward

Symbol	Name	Function Class
Tssr128062	transcription start site region 128062	1197 bp upstream
Tssr128063	transcription start site region 128063	393 bp upstream