rs50017686 SNP Detail

Summary

• ID
  rs50017686
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:45606508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGTGTGTT TATGTATGTG
  TATGTGTTTC TGTGGGTGTG TATGTGTGTG TGTGTGTGTG TGTATAATGT GAATGGGGTC
  AGGTATGCCA TAGTGCCTGT TTAGATATCA AAGGGCAACT TTGTGGATTT GGTTTATTTC
  CTCCATTTTT CTTGGATTTT GGAGAATAAA TATAGGTTAG TAGGCGAGTG AAGCAACTAC
  Y
  GTCACCCTCT GAGACATATC CCCTGTCCTA GAAGAGACTT TTTTTTTTTG ACTGAAAAAA
  AGTCTGTAAG CAATGATTAC AAACTAAACT TACTAATTAG AAGAAATGAC CAGAGGTAGC
  TGGCATCTCT GGCTTGCTCT TTGATGGAGT GATTTAAGCT GTGCTCCTGA GTCTAGCCCC
  TTTAGCTGCC CTGTTCTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss52410607	NES15387116	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs50017686					SNP	C	C	C	C	C	C	T	C	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52410607	NES15387116	PERLEGEN	MM_PANEL	f	SNP	C/T