rs50029217 SNP Detail

Summary

• ID
  rs50029217
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128128046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGCATATCA TAATTTTTGG CTGCCCTGGA ACACTCTGTG
  TAGACCAGGC TGCCCTGGAA CACTCTGTGT AGACCAGGCT GGCCCAGAAC TCACAGAGAA
  Y
  CTGACTGCTT CTGTCCCCTG AACACTAGGA TAAAGGAGTG TGCTGCCACA CAAGCTCAAC
  TAAGCGTGTC CCGCTTTCTA TTTCCTGAGG AGACTCAGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147556453	ENSMUSSNP2965169	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50029217					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128128046 () rs orientation: forward

Symbol	Name	Function Class
Rr564691	regulatory region 564691	762 bp distal
Rr564692	regulatory region 564692	300 bp distal
Rr564693	regulatory region 564693	1600 bp proximal