rs50031350 SNP Detail

Summary

• ID
  rs50031350
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77922405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTGGCTC TGCCTCTTGA
  ATGCTGGGAT TAAAGGTGTG CTCCATCATG CTCAGCTTAA ATATTTTGTT GTTGTTTGTT
  TGTTTGTCCA TTTGAAGGTA TCAAAAGTCA ATCTCAGCTA TCAACTGAAG CTGAGTATGG
  TAGCCTATGC CTATAAATCC CACGGTCAGA AGGCTGAGGC AGGAGGATTG TCAAAAGCTC
  R
  AGACCAGACT GGACTGCTGT GCAAAGCCAA AAACAAAAAA AAACAAAAAT GAAAAGATGC
  TGATTTGGTG GAGCTCTGTC CGACAGCAGC TTTCCCTTCA AATATCTGTT AGACCTTTGG
  AAATGTGGCA AAATCTGGTA AGGTGGCTTT GGTGGATGGC AGGAGAGTAA AGAAGTAAGA
  GATGAGTCTG GGGTGGAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136663659	ENSMUSSNP7089709	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50031350					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77922405 () rs orientation: forward

Symbol	Name	Function Class
Gm23609	predicted gene, 23609	1025 bp upstream
Gm39375	predicted gene, 39375	within coordinates
Gm69108	predicted gene, 69108	1200 bp upstream
Rr683457	regulatory region 683457	1066 bp distal