rs50033774 SNP Detail

Summary

• ID
  rs50033774
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51491487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTT CAACTCAGGA ATGTGCCTGC
  C
  TTTGTTTCTT TCTGACAACC TGGTT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss139477914	ENSMUSSNP6693152	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss324622189	CHEV_14_51873705	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50033774					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51491487 () rs orientation: forward

Symbol	Name	Function Class
Gm62421	predicted gene, 62421	within coordinates
Rnase2a	ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin)	1232 bp downstream
Tssr125425	transcription start site region 125425	145 bp downstream
Tssr128435	transcription start site region 128435	1716 bp downstream