rs50034732 SNP Detail

Summary

• ID
  rs50034732
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:12485693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTTTAAT TTTTCTGTAG
  TGAACTTATA TAGTTACTTC CTTCTTGTCA TTATTCTTAG AACATTTGGT ATTTACCACT
  TGCAGTTTAT TTACATTGTA CAGGTATTTT ATGTGCTTCA GGATATTAAA AATGTATGCA
  CAGATGTGTT TAGGTTATAT GAAAATACTA CAATTTTTAA AAACATTTAT TTTCCTTTTG
  Y
  GTGAGGTGCA GTGGGGTGGG GTTAGACCAT GTGAGTGCAG TACCCACCAA GGCCAGAAGT
  GGGCACAATA TTCTCCTGGA GCCAGAGTTG GAGGTTGTAA GCTTCCTGAT GTTGGATTTT
  GGAGTTGAAT TCTGTTCCTC TGCAAGAGCA GACAGTTAAG AGCGATTCAT CTCCCCATTC
  CACACTACAC TCTGAAGGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146299349	ENSMUSSNP3734838	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50034732					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:12485693 () rs orientation: forward

Symbol	Name	Function Class
Rr551920	regulatory region 551920	49 bp proximal