rs50035661 SNP Detail

Summary

• ID
  rs50035661
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18999209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAG AGCTGCCAGG ACTAGCAGAC
  A
  GCCCGGGAGT GAGCCGAGAA CAGCC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148471799	ENSMUSSNP1019787	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs50035661					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18999209 () rs orientation: forward

Symbol	Name	Function Class
Rr167144	regulatory region 167144	within coordinates
Rr167145	regulatory region 167145	791 bp proximal
Tssr64812	transcription start site region 64812	1012 bp upstream
Tssr70883	transcription start site region 70883	801 bp upstream
Tssr70884	transcription start site region 70884	456 bp upstream
Tssr70885	transcription start site region 70885	705 bp downstream
Tssr70886	transcription start site region 70886	1258 bp downstream
Vasp	vasodilator-stimulated phosphoprotein	within coordinates