rs50035901 SNP Detail

Summary

• ID
  rs50035901
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:51478382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AAAAATAAAA ATAATATGAA AGAAGACAGT ATCACCCACC
  TTCCCCCTAA AAAGTCCATA AATCCTATAT CTATATCTCC AGTGATAATT GCTTAGATGA
  A
  CCACACAACA CAGAACTTAA TACACATTCA TAAACTTAAT CAAACAGTGT GAAAACTACA
  TAAAGAAACA ATGAACTAAG AATGAACTTA CAGAAAACCA A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss145753180	ENSMUSSNP4913542	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs50035901					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:51478382 () rs orientation: forward

Symbol	Name	Function Class
Rr528702	regulatory region 528702	244 bp proximal
Rr528703	regulatory region 528703	1146 bp proximal
Tbc1d5	TBC1 domain family, member 5	within coordinates
Tssr148604	transcription start site region 148604	277 bp downstream