rs50037798 SNP Detail

Summary

• ID
  rs50037798
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:12501970 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACAGTCAA GTGGAAACTA
  TTACTGCAGA CGCTTCCTAA AATATAAACT TTACAACATA AAAGGACTTA AGTGGAATCA
  CTCTGTATGG GGGACCAGTG CCCCTACTAG AAATCACAAG GATAACAAAT AAAAACTCAA
  TGTCAGAAAT GCGTTTCTTC TACTGGGGCT GCTGGCCAGT GAGGTTCCAC AGACCCCCCC
  C
  CCCCCCGCGC CAACATTACA GGCAGTCAGC ACTACCCTTG GTAACCTTTC CGAACCTGAT
  GGTAAGACCC TATTGCTGAG TCATAGAACA CGGACAGCGT CAAGCTGGAA CTGACCTAGA
  AGCTTTATCC CTACTGGCTC AGTCCCCCGA GTGCTGGAGA TCCGCTACTG CAGAAAAGCA
  ATCATCGTAT CCAGCTGGGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145184213	ENSMUSSNP5159037	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50037798					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:12501970 () rs orientation: forward

Symbol	Name	Function Class
Map3k4	mitogen-activated protein kinase kinase kinase 4	within coordinates
Rr392297	regulatory region 392297	5 bp upstream