rs50038231 SNP Detail

Summary

• ID
  rs50038231
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156556322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCCTCCCT TCCGTCTGTC CGTCAGATAG GATCTCCCTA
  TGTAGCCCTG GCTAGCCTGC GACCCTATGC AGAGCAGGTT GGCCTTAAAC TCACAGAGAT
  M
  AGCCTGCTTC TGCCTCCCAA GTGCTGAGAT TAAAGGCCTA AGCCCCAGTC TGTGTGGTAT
  TTAACAGGCA ACGACTTTGT TTTGATCTTT ATCTTAGAC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148080982	ENSMUSSNP6380865	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320581489	CHEV_2_156540138	CHEVERUD	SCREENING_POP	f	SNP		C	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs50038231					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156556322 () rs orientation: forward

Symbol	Name	Function Class
4930405A21Rik	RIKEN cDNA 4930405A21 gene	137 bp downstream
Dlgap4	DLG associated protein 4	within coordinates