rs50055186 SNP Detail

Summary

• ID
  rs50055186
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81933538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TGCTTTATGC TTTTAGCCAT GAAGAATGAC TCTAATCAAG
  TCGTTTTTGT TTTTTTTAAT CTCAATTATT TTATATGTAT GGGTGTTGTG CCTCTGTGTA
  W
  GCCTATTCTG TGACTGCAGT ACCTGAGGAG GCCAGAAGGG GGCATCAGAT GCTTTGGAAC
  TGTAGATAGA GATGGCTATG AGCTGTCATG CGGGTTATAG G                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133338036	ENSMUSSNP709571	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50055186					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81933538 () rs orientation: forward

Symbol	Name	Function Class
Gcfc2	GC-rich sequence DNA binding factor 2	within coordinates
Mrpl19	mitochondrial ribosomal protein L19	1294 bp downstream
Rr632566	regulatory region 632566	28 bp proximal