rs50058651 SNP Detail

Summary

• ID
  rs50058651
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:13044489 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TCTAT TCCATTGATC TACCTGCCTG
  Y
  CACTGTACCA ATACCATGCA GTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss145190685	ENSMUSSNP5546244	ENSEMBL	ENSEMBL_Sanger	r	SNP	G	G
ss325305558	CHEV_17_13018468	CHEVERUD	SCREENING_POP	r	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50058651					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:13044489 () rs orientation: reverse

Symbol	Name	Function Class
Airn	antisense Igf2r RNA	within coordinates
Rr392300	regulatory region 392300	within coordinates