rs50063067 SNP Detail

Summary

• ID
  rs50063067
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:55476273 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAG TGGCTGTCCT GTAACTCACT
  T
  TGTAGACTAG GCTGGCCTCA GACTC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146361506	ENSMUSSNP2615227	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50063067					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:55476273 () rs orientation: forward

Symbol	Name	Function Class
Gm12510	predicted gene 12510	within coordinates
Rr376520	regulatory region 376520	within coordinates
Rr592486	regulatory region 592486	1742 bp distal
Rr592487	regulatory region 592487	1717 bp proximal
Rr592488	regulatory region 592488	1775 bp proximal
Tssr37333	transcription start site region 37333	1311 bp upstream
Tssr37334	transcription start site region 37334	1453 bp upstream
Tssr37335	transcription start site region 37335	1599 bp upstream
Tssr37336	transcription start site region 37336	1650 bp upstream
Tssr37337	transcription start site region 37337	1913 bp upstream
Tssr41779	transcription start site region 41779	872 bp upstream
Tssr41780	transcription start site region 41780	1109 bp downstream