rs50066343 SNP Detail

Summary

• ID
  rs50066343
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82926702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAATATAC AGTATACACA
  CACTGTGGAG TATACAGTAT ACACACACTG TGGAGTATAC AGTATACACA CACTGTGGAG
  TAGTATACAG CGGTAAAAGA ATAAAACCTT GTTATCTGCA ACAATGTGGG AGAAGTTGTG
  CAAGTCACAA TGTTAAGTGA AAGACTCCAG GTACAGAAAA AGAAAAAAAA TCCTATTTTC
  G
  CTCTTATATA AGGAAGCTAG ATAGACATAT GGACATTAGT AAAGAGGTGG TTACCAGAGG
  CTGGGGAGAG GAGAAGAGAG GGAAGGGTGT GGAAGGACTT AGTACAGGTA GGTACTAAGT
  TATGCTTAAT TAAAATAGAT ACTTTCTGCT GTTCTGGTGC ACAGTGGAAA AAGGATAGGT
  AGTGGTGATG CCAATATATT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136700280	ENSMUSSNP5931495	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50066343					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82926702 () rs orientation: forward

Symbol	Name	Function Class
Gm39383	predicted gene, 39383	1988 bp downstream
Rr401563	regulatory region 401563	531 bp downstream