rs50076161 SNP Detail

Summary

• ID
  rs50076161
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:30529227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTGAAACT CCTTAACATA
  GACGCATAAC TTGGCAAAGA CTGCAAGATT CTTCCTTGTC TCCTGTGTCA CCCTAACCCT
  GGCTTTCTAC ACCTTATATT AGTATCCACC CCTTAAAATA AAACCAATTC CTTCTCTGCT
  TTCTCTGGTT TAAAAAGTTT GACTACACCT GAGATACCCA CAGAGAAATA GACATCTTTT
  R
  TTAGATTTGG ACTTCTGGGA AGGTGTAACT CAGGTTTGAA AATGGTGGAG GTCTTCTGTG
  ATTAGTGGCT GCTGACCCTA TTCTCTGAAG ACCACTCTGG TCTCTAATGG AGAGCCGTCT
  CTCCCCTGGT GACCATGGCC TTCCCACCCA GTTCTGCTAA AGCCAATGTC CCTTCTGTTG
  CCGTGTAATC TACACTCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss52363807	NES15389163	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs50076161					SNP	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52363807	NES15389163	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:30529227 () rs orientation: forward

Symbol	Name	Function Class
Gm28806	predicted gene 28806	within coordinates
Tssr113087	transcription start site region 113087	156 bp downstream