rs50076294 SNP Detail

Summary

• ID
  rs50076294
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121506538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTAATTGAA CACTATGTCA ACATTAATTA AAGTCTTTGG
  AATCAACAAA GCAAGCAAAG CTGAATTCAC CTTGGGAGAG AATAGGAAAA TGGAATAAAA
  Y
  GAAGAAAGGA ATTTAATTTT TTTCCGGTCT ACCACAGGCT GTGAATAAAT GGTCTCTACA
  GGATTTCTGG AAGCCGTTCC ATTTTTGGTT TTGTTGTTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135727257	ENSMUSSNP631748	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50076294					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121506538 () rs orientation: forward

Symbol	Name	Function Class
Gm43607	predicted gene 43607	443 bp upstream
Rr584146	regulatory region 584146	259 bp proximal