rs50077270 SNP Detail

Summary

• ID
  rs50077270
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:26681732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAGAAGGT AATTTTATGT
  GTCATTTTAG TCGCATGATA ACTAGATACT TACTTGGTCA AGCATTGCTT CAGTCAGGTA
  TGCCTAGCCT CCTGCATTCT GTCTGCTGCC TGCACATATA CTTGGATACC TATGAAGTCA
  CTCCAATGTA TTTGTAAATG AAGTCATACC ACTAGGTGTT TCTGTGAGGA TATATTGGAT
  K
  AAAATAGCAT TTGAATTAAT AGACTGAATA AAGAGGTTTA CCTCTATACT GTTGTTGGCC
  TCATCTAGTT TGTTACAGAC CTGAATAGAA CAAAATGCTA AAAATTCTGT TGCCCTCCTC
  ATTACCCTTG AGATGGGAGA GCAGTCTTCA GCCATTGGGC TAGAACTGAA GAGCATATTA
  TCAACTCTCC TGGTTCTCAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134696843	ENSMUSSNP3893828	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50077270					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:26681732 () rs orientation: forward

Symbol	Name	Function Class
Gm55656	predicted gene, 55656	1272 bp upstream
Gm65182	predicted gene, 65182	within coordinates